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entity
attribute
quality
assertional qualifier
negative
positive
existence quality
hypothetical
fictional
predicted
real
unsupported
virtual
informational quality
agreement quality
agreement
consensus
full agreement
disagreement
full disagreement
quality descriptor
excellent quality
good quality
neither good nor poor quality
poor quality
very good quality
very poor quality
quantity modifier
a little quantifier
completely quantifier
moderately quantifier
mostly quantifier
none quantifier
satisfaction qualifier
dissatisfied qualifier
neither satisfied or dissatisfied qualifier
satisfied qualifier
very dissatisfied qualifier
status descriptor
temporal qualifier
always
most of the time
never
some of the time
truth value
false
true
intensity
fatal
mild
moderate
severe
strong
weak
normality
abnormal
decreased
increased
normal
object quality
biological quality
biological sex
female
intersex
hermaphrodite
male
cellular quality
ploidy
disease
ethnicity
life status
alive
healthy
sick
dead
parental transmission
maternally transmitted
paternally transmitted
phenotype
race
zygosity
hemizygous
heterozygous
homozygous
nullizygous
chemical quality
charge quality
charged
complete charge
negative charge
positive charge
partial charge
partial negative charge
partial positive charge
uncharged
coding frame offset
molecular orbital
molecular structure descriptor
biomolecular structure descriptor
primary structure descriptor
biopolymer sequence
nucleic acid sequence
coding sequence
deoxyribonucleic acid sequence
ribonucleic acid sequence
protein sequence
sequence assembly
quaternary structure
secondary structure descriptor
tertiary structure descriptor
3d structure model
polar quality
non-polar
polar
toxicity
non toxic
toxic
compositional quality
heterogeneous
homogeneous
fitness
mereological quality
containment quality
empty
full
object relational quality
replica quality
sample quality
synthetic quality
shape
curvature
bent
curved
straight
structural quality
disordered
helicity
circularly helical
left-handed helical
right-handed helical
rigid
text quality
written
draft
finalized
reviewed
editor reviewed
peer-reviewed
process quality
process status
aborted
completed
not started
cancelled
planned
ongoing
suspended
realizable entity
capability
disposition
mutual disposition
to interact and to be interacted with
dysfunction
function
to be interacted with
to be actively interacted with
to be modified
to be cleaved
to be combined
to be a part of
to be conformationally changed
to be activated
to be inhibited
to be covalently modified
to gain a covalent bond
to lose a covalent bond
to be electronically modified
to gain an electron
to lose an electron
to be transported
to luminesce
to fluoresce
to be passively interacted with
to be observed
to be examined
to be compared
to be recorded
to be translocated
to breathe
to interact with
to actively interact with
to assemble
to associate
to bind to
to consume
to ingest
to decode information
to encode information
to investigate
to identify
to measure
to maintain information
to modify
to change appearance
to demagnify
to distort
to magnify
to change energetically
to change the activation energy
to increase the activation energy
to reduce the activation energy
to modify electronically
to ionize
to negatively charge
to positively charge
to modify oxidation state of
to oxidize
to reduce
to reduce energy
to cool
to freeze
to emit
to supply energy
to excite
to heat
to boil
to supply electricity
to change materially
to cause disease
to combine
to covalently modify
to add a covalent bond
to remove a covalent bond
to disassemble
to cleave
to change spatially
to contain
to immobilize
to disassociate
to inject
to infect
to modify conformation of
to conformationally activate
to conformationally inhibit
to regulate
to regulate the rate of formation
to decrease the rate of formation
to increase the rate of formation
to separate
to extract
to filter
to produce
to record
to retrieve
to provide
to serve as
to serve as a host
to serve as a primer for DNA synthesis
to serve as a template for molecular synthesis
to serve as a template for DNA synthesis
to serve as a template for protein synthesis
to serve as a template for RNA synthesis
to store
to transport
to passively interact with
to be a member of
to describe
to characterize
to observe
to examine
to compare
to test a hypothesis
to translocate
role
abstract role
comparative role
duplicate role
replicate role
variant role
sequence variant role
deletion variant role
insertion variant role
positional role
processual role
chemical entity role
chemical substance role
buffer role
host role
reagent role
toxic role
poison role
toxin role
molecular entity role
cofactor role
co-enzyme role
co-substrate role
prosthetic group role
product role
reactant role
molecular tracer role
substrate role
co-enzyme role
co-substrate role
prosthetic group role
regulator role
activator role
catalytic role
inhibitor role
investigational role
evaluation role
control role
test role
subject role
social role
occupational role
academic role
department chair role
professor role
student advisor role
graduate student advisor role
undergraduate student advisor role
student role
administrative role
secretary role
medical role
dentist role
doctor role
nurse role
patient role
publishing role
author role
publisher role
object
information content entity
computational entity
cell (informational)
referencing cell
referent cell
unique cell
column
database column
data item
dataset
versioned dataset
metadata
scientific data
biological data
bioinformatic data
genetic data
medical data
chemical data
database
database entry
database key
foreign database key
primary database key
database table
namespace
ovopub
assertion ovopub
collection ovopub
row
database row
software entity
software application
software interpreter
web service
REST web service
SOAP web service
semantic web service
SADI semantic web service
software library
software method
software module
software script
user account
geometric entity
collection of points
curve
arc
curve segment
line
edge
infinite line
line segment
directed line segment
arrowed line segment
double arrowed line segment
single arrowed line segment
axis
category axis
primary category axis
secondary category axis
value axis
bottom value axis
Cartesian coordinate axis
x-axis
y-axis
z-axis
left value axis
right value axis
scaled value axis
linear value axis
logarithmic value axis
top value axis
polygon edge
tick mark
major tick mark
minor tick mark
positionally oriented line
horizontal line
vertical line
ray
vector line
surface normal
vertex normal
statistical graph line
drop line
trend line
decreasing line
increasing line
plateau line
point
1D cartesian point
2D cartesian point
3D cartesian point
data point
stationary point
local maximum stationary point
global maximal stationary point
local minimum stationary point
global minimal stationary point
node
polygon vertex
terminal point
endpoint
start point
polygon
quadrilateral
rectangle
bar
triangle
polygonal face
polyhedral skeleton
polyhedral surface
polyline
language entity
character
description
annotation
answer
definition
history
evolutionary lineage
family history
medical history
proposition
argument
deductive argument
inductive argument
invalid argument
valid argument
sound argument
belief
opinion
diagnostic opinion
speculation
comment
conclusion
diagnosis
evidence
hypothesis
idea
justification
reason
purpose
objective
premise
prognosis
statement
statement of consequence
specification
action specification
experimental protocol
standard operating procedure
study design
pathway
chemical reaction pathway
biochemical pathway
metabolic pathway
pharmacokinetic pathway
regulatory pathway
pharmacodynamic pathway
chemical degradation pathway
chemical synthesis pathway
plan
recipe
functional specification
design
design specification
criterion
exclusion criterion
inclusion criterion
formal specification
ontology
vocabulary
terminology
genotype
measurement scale
binary scale
nomimal scale
numeric scale
decimal scale
integer scale
spatial specification
coordinate system
cartesian coordinate system
cylindrical coordinate system
polar coordinate system
spherical coordinate system
structure
chemical structure
electronic structure
molecular structure
crystal structure
vocabulary
terminology
notation
chemical notation
InCHI notation
sequence variation notation
hgvs notation
standard
syndrome
language
sign language
verbal language
written language
morpheme
phrase
sentence
clause
question
term
concept
category
descriptor
keyword
label
identifier
informational entity identifier
email address
IP number
record identifier
PDB record identifier
software process identifier
telephone number
cellular phone number
fax number
home phone number
work phone number
URL
physical entity identifier
chemical identifier
molecular identifier
microarray probe set identifier
PDB chain identifier
positional identifier
address
apartment number
street name
unique identifier
version label
document version
software version label
major version number
minor version number
revision number
language label
name
brand name
common name
first name
generic name
last name
middle name
middle initial
personal name
legal name
preferred name
scientific name
gene symbol
namespace label
numeric label
title
document title
graph title
primary title
primary graph title
secondary graph title
secondary title
term variant
antonym
homonym
hypernym
hyponym
synonym
textual entity
document
booklet
diary
email
legal document
bill
brief
legislation
patent
statute
letter
manuscript
note
ontology document
OBO ontology
OWL ontology
RDFS ontology
publication
article
peer reviewed article
blog
book
book volume
conference proceedings
edited publication
issue
manual
novel
technical report
thesis document
honor's thesis
master's thesis
phd thesis
record
medical health record
versioned record
report
medical report
web page
document component
citation
document section
abstract section
acknowledgements section
author contribution section
author section
bibliography section
book section
chapter
copyright section
correspondence section
discussion section
introduction section
materials and methods section
materials section
methods section
results section
table of contents
reference
excerpt
quote
paragraph
text span
verbal language entity
consonant
syllable
vowel
visual language entity
word
mathematical entity
algorithm
workflow
association
chemical-disease association
chemical-gene assocation
chemical-pathway association
database cross-reference
exact cross-reference
epimer association
gene-disease association
gene-disease biomarker association
...se association linked with altered gene expression
...isease association linked with genomic alterations
fusion gene-disease association
... association linked with chromosomal rearrangement
...-disease association linked with genetic variation
...ne-disease association linked with causal mutation
...e association linked with germline causal mutation
...se association linked with somatic causal mutation
...disease association linked with modifying mutation
...ssociation linked with germline modifying mutation
...association linked with somatic modifying mutation
...se association linked with susceptibility mutation
...iation linked with post-translational modification
therapeutic gene-disease association
statistical association
correlation
equation
differential equation
ordinary differential equation
partial differential equation
movement equation
diffusion equation
interval
left closed interval
closed interval
left open interval
open interval
page range
right closed interval
closed interval
right open interval
open interval
logical operator
conjunction (and)
disjunction (or)
exclusive disjunction (xor)
implies (->)
negation (not)
pattern
sequence motif
sequence profile
structural motif
set
class
collection
a collection of duplicates
a collection of replicates
catalog
collection of 3d molecular structure models
collection of documents
book series
periodical
journal
magazine
newspaper
website
collection of points
protein family
sequence alignment
multiple sequence alignment
pairwise sequence alignment
unigene cluster
empty set
interval
left closed interval
closed interval
left open interval
open interval
page range
right closed interval
closed interval
right open interval
open interval
list
data series
intersection
ordered list
author list
sequence
union
set item
collection item
duplicate
replicate
list item
ordered list item
tensor
rank nonzero tensor
matrix
vector
scalar
number
measurement value
position
altitude
center of mass
coordinate
cartesian coordinate
3D cartesian coordinate
x cartesian coordinate
y cartesian coordinate
z cartesian coordinate
polar coordinate
geographic position
latitude
longitude
postal code
linear position
end position
sequence end position
text span end position
word end position
ordinal position
character position
process number
sequence element position
sequence end position
sequence start position
start position
sequence start position
text span start position
word start position
orientation
quantity
centrality measure
mean
median
mode
dimensional quantity
age
dose
effective dose
gene expression value
protein expression value
rate of change
frequency
speed
velocity
spatial quantity
1D extent quantity
depth
thickness
height
length
width
2D extent quantity
area
surface area
length of perimeter
circumference
3D extent quantity
concentration
density
volume
mass
time measurement
time instant
date of database submission
date of issue
end date
end time
start date
start time
time interval
century
day
hour
millennium
minute
month
second
week
year
dimensionless quantity
count
copy number variation
difference in number of objects produced
decrease in number of objects produced
increase in number of objects produced
edition number
generation number
member count
number of objects consumed
number of objects produced
page number
page total
volume number
pH
probability measure
expected value
probability value
standard score
quantile
percentile
ratio
aspect ratio
differential gene expression ratio
...istic based decreased differential gene expression
...istic based increased differential gene expression
DisGeNET disease specificity
DisGeNET Pleiotropy Index
percentage
slope
specific gravity
t-statistic
likelihood
log likelihood
maximal value
minimal value
standard deviation
sum
uncertainty value
unit of measurement
variable
control variable
dependent variable
independent variable
parameter
default parameter
vector space
media
audio recording
figure
chart
bubble chart
flowchart
Gantt chart
heatmap
geographic heatmap
histogram
block histogram
map
matrix chart
mereological chart
pie chart
treemap
network diagram
directed acyclic graph
tree diagram
dendrogram
statistical graph
bar graph
horizontal bar graph
stacked bar graph
vertical bar graph
line-bar graph
boxplot
line graph
scatterplot
stack graph
streamgraph
textual chart
phrase net diagram
tag cloud
word tree
venn diagram
image
photograph
geographic image
table
figure part
legend
plot
file
molecular structure file
PDB file
movie
slide
slideshow
television program
representation
model
object model
process model
symbol
social entity
social relation
affiliation
social structure
collective
community
family
organization
academic organization
academic department
university
corporation
institute
regulatory authority
drug regulatory authority
population
human population
ethnic group
study group
control group
intervention group
material entity
chemical entity
atom
actinium atom
aluminium atom
americium atom
antimony atom
argon atom
arsenic atom
astatine atom
barium atom
berkelium atom
beryllium atom
bismuth atom
bohrium atom
boron atom
bromine atom
cadmium atom
caesium atom
calcium atom
californium atom
carbon atom
cerium atom
chlorine atom
chromium atom
cobalt atom
copernicium atom
copper atom
curium atom
darmstadtium atom
dubnium atom
dysprosium atom
einsteinium atom
erbium atom
europium atom
fermium atom
fluorine atom
francium atom
gadolinium atom
gallium atom
germanium atom
gold atom
hafnium atom
hassium atom
helium atom
holmium atom
hydrogen atom
indium atom
iodine atom
iridium atom
iron atom
krypton atom
lanthanum atom
lawrencium atom
lead atom
lithium atom
lutetium atom
magnesium atom
manganese atom
meitnerium atom
mendelevium atom
mercury atom
molybdemum atom
neodymium atom
neon atom
neptunium atom
nickel atom
niobium atom
nitrogen atom
nobelium atom
osmium atom
oxygen atom
palladium atom
phosphorus atom
platinum atom
plutonium atom
polonium atom
potassium atom
praseodymium atom
promethium atom
protactinium atom
radium atom
radon atom
rhenium atom
rhodium atom
roentgenium atom
rubidium atom
ruthenium atom
rutherfordium atom
samarium atom
scandium atom
seaborgium atom
selenium atom
silicon atom
silver atom
sodium atom
strontium atom
sulfur atom
tantalum atom
technetium atom
tellurium atom
terbium atom
thallium atom
thorium atom
thulium atom
tin atom
titanium atom
tungsten atom
ununhexium atom
ununoctium atom
ununpentium atom
ununquadium atom
ununseptium atom
unutrium atom
uranium atom
vanadium atom
xenon atom
ytterbium atom
yttrium atom
zinc atom
zirconium atom
chemical substance
analyte
binary compound
ionic compound
catalyst
centrifugation substance
centrifugation pellet
supernatant
chemical complex
molecular complex
chromosome
double stranded nucleic acid
double stranded DNA
double stranded RNA
protein complex
antibody
drug
pharmaceutical drug
biologic
poison
heterogeneous substance
biological entity
biological fluid
cell
unicellular organism
e.coli
cell line
genome
organ
organism
cellular organism
multicellular organism
human
mouse
rat
worm
unicellular organism
e.coli
host
non-cellular organism
viroid
virus
pathogen
strain
subcellular entity
tissue
chemical salt
strong chemical salt
weak chemical salt
device
communication device
radio receiver
telephone
data collection device
mass spectrometer
microarray device
nmr device
data storage device
hard disk drive
solid state hard drive
radar
liquid solution
liquid solution component
acid
base
buffer
solute
solvent
nonpolar solvent
polar solvent
placebo
reagent
sample
specimen
wave
sound wave
homogeneous substance
chemical element
allotrope
carbon allotrope
aggregated carbon nanorods
amorphous carbon
carbon nanofoam
chaoite
diamond
fullerene
glassy carbon
graphite
ionsdaleite
ingredient
pharmaceutical ingredient
active ingredient
inactive ingredient
ion
anion
cation
molecule
antigen
isomer
stereoisomer
diastereomer
enantiomer
epimer
optical isomer
structural isomer
ligand
molecular regulator
activator
inhibitor
organic molecule
amino acid
lipid
monosaccharide
organic polymer
amino acid polymer
oligopeptide
peptide
polypeptide
protein
enzyme
biopolymer
carbohydrate
nucleic acid
deoxyribonucleic acid
deoxyribonucleic acid primer
deoxyribonucleic acid template
nucleic acid strand
negative nucleic acid strand
positive nucleic acid strand
ribonucleic acid
RNA transcript
messenger RNA
mRNA splice variant
mature mRNA
pre-mRNA
non-protein coding RNA (ncRNA)
microRNA (miRNA)
small cytoplasmic RNA (scRNA)
small nuclear RNA (snRNA)
small nucleolar RNA (snoRNA)
transfer RNA (tRNA)
polymer
product
signal
signal transducer
messenger
second messenger
receptor
submolecular entity
strong submolecular component
covalent bond
aromatic bond
double bond
single bond
disulfide bond
triple bond
submolecule
chemical functional group
ring
aromatic ring
heterocyclic ring
homocyclic ring
monomer
organic submolecule
amino acid polymer submolecule
alpha helix
amino acid residue
beta strand
post-translational modification
protein domain
carbohydrate residue
lipid residue
nucleic acid part
cis regulatory element
gene
allele
dna gene
non-protein coding RNA (ncRNA) gene
ribosomal RNA gene
small cytoplasmic RNA (scRNA) gene
small nuclear RNA (snRNA) gene
small nucleolar RNA (snoRNA) gene
transfer RNA (tRNA) gene
predicted gene
protein coding gene
rna gene
functional rna coding gene
validated gene
gene component
3' untranslated region
5' untranslated region
exon
gene regulatory component
gene enhancer
gene promoter
intron
open reading frame
protein coding sequence
genetic polymorphism
genomic sequence variant
haplotype
nucleotide residue
deoxyribonucleotide residue
ribonucleotide residue
single nucleotide polymorphism
operon
pseudogene
RNA transcript component
splice site
3' splice site
5' splice site
start codon
stop codon
trans-regulatory element
weak submolecular component
base pair
base stack
dipole-dipole interaction
hydrogen bond
low barrier hydrogen bond
ionic interaction
cation pi interaction
van der Waals interaction
spatial region
geographic region
environment
geolegal region
geopolitical region
city
country
province
state
territory
township
site
hole
molecular site
active site
binding site
allosteric site
molecular pocket
spatial boundary
material boundary
specialized object
anatomical entity
person
academic
professor
student
medical practitioner
doctor
nurse
patient
study subject
specialized material entity
process
behaviour
emotion
indifference
apathy
negative emotion
annoyance
frustration
apprehension
anxiety
angst
fear
dread
terror
panic
worry
regret
remorse
boredom
disappointment
discouragement
embarassment
envy
jealousy
guilt
hostility
disgust
anger
rage
contempt
hate
loathing
resentment
hunger
hurt
humiliation
pain
suffering
hysteria
indecision
irritability
loneliness
pity
sadness
depression
despair
grief
misery
sorrow
shame
shock
shyness
suicidal
positive emotion
affection
arousal
awe
boldness
ecstasy
excitement
gratitude
happiness
contentment
satisfaction
pride
euphoria
joy
pleasure
hope
interest
desire
curiosity
intent
lust
passion
love
satisfaction
pride
surprise
wonder
interacting
chemical interaction
chemical effect
drug drug interaction
chemical exposure
chemical reaction
acid-base reaction
catalyzed reaction
biochemical reaction
inorganic reaction
decomposition reaction
displacement reaction
double displacement reaction
single displacement reaction
synthesis reaction
isomerization reaction
molecular modification
organic reaction
addition reaction
non-polar addition reaction
free radical addition
polar addition reaction
electrophilic addition reaction
nucleophilic addition reaction
redox reaction
metabolism
anabolism
catabolism
communicating
conversing
gesturing
speech
comparing
creating
birthing
chemical synthesis
biosynthesis
transcription
translation
molecular complex formation
evolving
learning
planning
predicting
reasoning
reproducing
biological reproduction
destroying
chemical destruction
decreased chemical destruction
increased chemical destruction
molecular complex dissociation
dying
measuring
modifying
observing
perception
regulating
regulation of capability
regulation of catalytic capability
biochemical activation
biochemical inhibition
regulation of process
process down-regulation
process maintenance
information maintenance
process up-regulation
regulation of biochemical process
regulation of transcription
regulation of translation
protein mediated regulation of translation
rna mediated regulation of translation
regulation of object quantity
regulation of molecular quantity
regulation of molecular degradation
...ed molecular degradation from decreased regulation
...ed molecular degradation from increased regulation
...ed molecular degradation from decreased regulation
...ed molecular degradation from increased regulation
regulation of molecular production
...sed molecular production from decreased regulation
...sed molecular production from increased regulation
...sed molecular production from decreased regulation
...sed molecular production from increased regulation
regulation of object consumption
...eased object consumption from increased regulation
...eased object consumption from increased regulation
maintenance of level of object consumption
regulation of object production
...reased object production from increased regulation
...reased object production from increased regulation
maintenance of quantity of object production
regulation of process duration
...ased duration of process from increased regulation
...ased duration of process from increased regulation
maintenance of duration of process
regulation of process frequency
...sed frequency of process from increased regulation
...sed frequency of process from increased regulation
maintenance of frequency of process
regulation of process spatial extent
...patial extent of process from decreased regulation
...patial extent of process from increased regulation
maintenance of spatial extent of process
sampling
transporting
chemical transport
membrane transport
active transport
primary active transport
secondary active transport
antiport enabled secondary active transport
symport enabled secondary active transport
passive transport
movement
active movement
locomotion
passive movement
diffusion
brownian motion
osmosis
procedure
assay
information processing
data analysis
data collection
data transformation
parameterized data transformation
information translation
information decoding
information encoding
literature curation
sofware execution
web service invocation
SADI web service invocation
investigation
experiment
intervention study
clinical trial
mass spectrometry experiment
microarray experiment
observational study
controlled observational cohort study
study
medical procedure
diagnostic test
differential diagnosis
medical diagnosis
medical intervention
medical screening
primer
deoxyribonucleic acid primer
target
substrate