https://w3id.org/omop/ontology/has_unit
For Dose Era: The Concept Id representing the unit of the specific drug ingredient. - For Specimen: The unit for the quantity of the specimen.
Map the UNIT_SOURCE_VALUE to a Standard Concept in the Unit domain. [Accepted Concepts](https://athena.ohdsi.org/search-terms/terms?domain=Unit&standardConcept=Standard&page=1&pageSize=15&query=) - For Measurement: There is currently no recommended unit for individual measurements, i.e. it is not mandatory to represent Hemoglobin a1C measurements as a percentage. UNIT_SOURCE_VALUES should be mapped to a Standard Concept in the Unit domain that best represents the unit as given in the source data.
There is no standardization requirement for units associated with MEASUREMENT_CONCEPT_IDs, however, it is the responsibility of the ETL to choose the most plausible unit. - For Observation: There is currently no recommended unit for individual observation concepts. UNIT_SOURCE_VALUES should be mapped to a Standard Concept in the Unit domain that best represents the unit as given in the source data.
There is no standardization requirement for units associated with OBSERVATION_CONCEPT_IDs, however, it is the responsibility of the ETL to choose the most plausible unit.
DOMAIN | PROPERTY | RANGE |
---|---|---|
Blank node (see implementation) | Has unit | Concept |
@prefix omop: <https://w3id.org/omop/ontology/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix owlready: <http://www.lesfleursdunormal.fr/static/_downloads/owlready_ontology.owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
omop:has_unit a owl:FunctionalProperty,
owl:ObjectProperty ;
rdfs:label "Has unit"^^xsd:string ;
owlready:python_name "unit"^^xsd:string ;
rdfs:comment "For Dose Era: The Concept Id representing the unit of the specific drug ingredient."@en,
"""For Measurement: There is currently no recommended unit for individual measurements, i.e. it is not mandatory to represent Hemoglobin a1C measurements as a percentage. UNIT_SOURCE_VALUES should be mapped to a Standard Concept in the Unit domain that best represents the unit as given in the source data.
There is no standardization requirement for units associated with MEASUREMENT_CONCEPT_IDs, however, it is the responsibility of the ETL to choose the most plausible unit."""@en,
"""For Observation: There is currently no recommended unit for individual observation concepts. UNIT_SOURCE_VALUES should be mapped to a Standard Concept in the Unit domain that best represents the unit as given in the source data.
There is no standardization requirement for units associated with OBSERVATION_CONCEPT_IDs, however, it is the responsibility of the ETL to choose the most plausible unit."""@en,
"""For Specimen: The unit for the quantity of the specimen.
Map the UNIT_SOURCE_VALUE to a Standard Concept in the Unit domain. [Accepted Concepts](https://athena.ohdsi.org/search-terms/terms?domain=Unit&standardConcept=Standard&page=1&pageSize=15&query=)"""@en ;
rdfs:domain [ a owl:Class ;
owl:unionOf ( omop:Observation omop:Measurement omop:DoseEra omop:Specimen ) ] ;
rdfs:range omop:Concept ;
omop:omop_cdm_name "dose_era.unit_concept_id#335 AS Concept"^^xsd:string,
"measurement.unit_concept_id#139 AS Concept"^^xsd:string,
"observation.unit_concept_id#159 AS Concept"^^xsd:string,
"specimen.unit_concept_id#214 AS Concept"^^xsd:string .